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Infection and Immunity, November 1999, p. 6139-6144, Vol. 67, No. 11
0019-9567/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Isolation, Characterization, cDNA Cloning, and
Antimicrobial Properties of Two Distinct Subfamilies of
-Defensins from Rhesus Macaque Leukocytes
Yi-Quan
Tang,1
Jun
Yuan,1
Christopher J.
Miller,2 and
Michael
E.
Selsted1,*
Department of Pathology, University of
California, Irvine, California 92697,1 and
California Regional Primate Research Center, Center for
Comparative Medicine, and School of Veterinary Medicine, University
of California, Davis, California 956162
Received 23 June 1999/Returned for modification 6 August
1999/Accepted 20 August 1999
 |
ABSTRACT |
Experiments to isolate and characterize rhesus macaque myeloid
-defensins (RMADs) were conducted. Seven RMAD peptides were isolated
and sequenced, and the cDNAs encoding six of these peptides and one
other
-defensin from bone marrow were also characterized. Four of
the RMADs were found to be highly similar to human neutrophil
-defensins HNP-1 to HNP-3, while the remaining four peptides were
much more similar to human enteric
-defensin HD-5. Two
-defensin pairs differed only by the presence or absence of an additional arginine at the amino termini of their mature peptides, indicative of
alternate posttranslational processing. The primary translation products of RMAD-1 to -8 are 94- and 96-amino-acid prepropeptides that
are highly similar to those of human
-defensins. Immunolocalization experiments revealed a granular cytoplasmic pattern in the cytoplasms of neutrophils, indistinguishable from the pattern observed after immunostaining of human myeloid
-defensins in polymorphonuclear leukocytes. Each of the purified peptides was tested for its in vitro
activities against Staphylococcus aureus 502a,
Listeria monocytogenes EGD, Escherichia coli
ML35, and Cryptococcus neoformans 271A. Several of the
peptides were microbicidal for the gram-positive bacteria and C. neoformans at defensin concentrations in the range of 2 to 5 µM. All of the peptides were bacteriostatic against E. coli, but none were bactericidal for this organism. This study is
the first to characterize the sequences and activities of
-defensins from nonhuman primates, data that should aid in delineating the role of
these peptides in rhesus macaque host defense.
 |
INTRODUCTION |
Antimicrobial peptides and proteins
of leukocytes contribute to the intra- and extracellular destruction of
invading microorganisms (5, 11, 17, 27). Among the
microbicidal peptides characterized to date are the
- and
-defensins, members of conformationally similar peptide families
that are distinguished by different tridisulfide motifs (10, 21,
26, 30).
-Defensins are prominently expressed in neutrophils
and intestinal Paneth cells of many mammals (22), in rabbit
kidney (3, 28), and in female reproductive epithelium (18). Many defensins exert potent activities against a broad spectrum of targets, including gram-positive and gram-negative bacteria, fungi, spirochetes, mycobacteria, protozoans, and enveloped viruses (reviewed in reference 13).
As a step toward the further elucidation of primate defensin function
in vivo, we conducted experiments to characterize rhesus macaque
myeloid
-defensins (RMADs). Seven RMADs were isolated and
characterized, and the cDNAs encoding six of these peptides and one
other
-defensin from bone marrow were also characterized. Immunolocalization experiments were performed to identify cells that
expressed peptides that cross-reacted with purified human neutrophil
-defensins 1 to 3 (HNP-1 to -3). Each of the purified peptides was
tested for its in vitro antimicrobial properties under conditions
allowing for the differentiation of microbistatic and microbicidal activities.
 |
MATERIALS AND METHODS |
Leukocyte isolation.
Anticoagulated whole blood was obtained
from healthy adult rhesus macaques housed at the California Regional
Primate Research Center. After sedimentation of erythrocytes with 3%
dextran sulfate, leukocytes were recovered from the plasma phase by
centrifugation at 300 × g. In initial experiments,
leukocytes were further purified by fractionation over Ficoll, which
produced neutrophil preparations of >98% purity that were snap frozen
and stored at
80°C until they were extracted (see below). In later
experiments, leukocytes were harvested and frozen after dextran
sedimentation of erythrocytes but without further purification.
Peptide extraction and purification.
We used a two-step
method for peptide extraction in which leukocyte pellets containing
107 cells were first suspended in 0.9 ml of 80:10
methanol-acetic acid, stirred for 18 h at 8°C, clarified by
centrifugation, and then dried in a Speed Vac centrifugal evaporator.
The dried residue was suspended in 1.0 ml of 80:20 methanol-water,
stirred for 6 h at 8°C, clarified as before, and lyophilized.
The lyophilate was dissolved in 0.1 ml of 5% acetic acid and
clarified, and the supernatant was subjected to high-performance liquid
chromatography (HPLC) purification as described below.
Chromatography.
Reversed-phase (RP) HPLC was performed with
a 4.6- by 250-mm Vydac C18 column equilibrated in 0.1%
trifluoroacetic acid (TFA)-water. Conditions for gradient elution with
acetonitrile containing 0.1% TFA are described in the legend to Fig.
1. Peptides were purified to homogeneity by sequential rounds of
RP-HPLC. Stock solutions of each peptide, prepared in 0.01% acetic
acid, were quantified by amino acid analysis (6).
Sequence determinations.
RMAD-1 to -7 were characterized by
amino acid analysis (6), matrix-assisted laser desorption
ionization-time of flight (MALDI-TOF) mass spectroscopy (MS), and
automated Edman sequence analysis. Prior to being sequenced, peptides
were reduced with 2-mercaptoethanol and alkylated with 4-vinylpyridine
as described previously (25).
Reverse transcriptase PCR.
Total RNA was isolated from
monkey bone marrow with RNA STAT-60 (TEL-TEST). Reverse transcription
was performed with SuperScript II reverse transcriptase (GIBCO BRL)
followed by PCR amplification with Taq polymerase (Qiagen)
for 35 cycles at 94°C for 1 min, 57°C for 1 min, and 72°C for 1 min. PCR primers were chosen according to published cDNA sequences of
HNP-1 and human enteric
-defensin 5 (HD-5) and were as follows:
RMAD-1s (5'-GTCTGCCCTCTCTGGTCAC-3') and RMAD-1a
(5'-CAAGCTCAGCAGCAGAATGC-3') for RMAD-1, -3, and -8 and
RMAD-1s and HD-5a (5'-TCTAGAAGCTCAGCGACAGC-3') for RMAD-4 to
-7. PCR products were gel purified, cloned into pCR 2.1 (Invitrogen), and sequenced.
Immunohistochemistry.
Anti-HNP-1 to -3 antibody was prepared
by immunization of a New Zealand White rabbit with a
glutaraldehyde-mediated, keyhole limpet hemocyanin conjugate of an
equimolar mixture of HNP-1, -2, and -3 (9). Dot blot
analysis with 40 to 60 ng each of RMAD-1 to -7 and 50 ng of HNP-2 (as a
positive control) demonstrated that anti-HNP-1 to -3 antibody
recognized RMAD-1, -2, and -3 only. Cytospin preparations of rhesus
macaque buffy coat cells were incubated with a 1:100 dilution of immune
serum or preimmune serum for 1 h at room temperature.
Immunoreactivity was visualized with a 1:200 dilution of biotinylated
goat anti-rabbit immunoglobulin G and developed with the
avidin-biotin-glucose oxidase system described previously
(29).
Antimicrobial assays.
Escherichia coli ML35,
Staphylococcus aureus 502A, Listeria
monocytogenes EGD, and Cryptococcus neoformans 271A
were utilized as target organisms in microbistatic (14) or
microbicidal (16) assays. Organisms were grown to mid-log
phase in Trypticase soy broth (bacteria) or Sabouraud dextrose broth
(C. neoformans), diluted to 105 cells per ml in
10 ml of warm 1% agarose containing 3 mg of glucose and
106 cells, and poured into 9-cm2 plastic petri
plates. Samples of peptide were loaded into 5-µl wells in the
agarose, incubated for 2 h at 37°C and then overlaid with
nutrient agar and incubated for 24 to 48 h. The zone of clearing around each well was measured to quantify antimicrobial activity. In
microbicidal assays, incubation mixtures contained 2 × 106 organisms per ml in 50 µl of 10 mM PIPES
[piperazine-N,N'-bis(2-ethanesulfonic acid), pH
7.4], 5 mM glucose, and peptide at concentrations ranging from 0 to 40 µg/ml. Incubation was carried out at 37°C for 2 h. Serial
dilutions of the incubation mixture were plated on nutrient agar and
CFU were counted to quantitate microbicidal activity.
Nucleotide sequence accession numbers.
The cDNA sequences
for the following RMADs have been submitted to GenBank and assigned the
numbers indicated: RMAD-1, AF188268; RMAD-3, AF188269; RMAD-8,
AF188270; RMAD-4 and -5, AF188271; and RMAD-6 and -7, AF188272.
 |
RESULTS |
Purification of RMADs.
Preliminary experiments revealed that
purified samples of previously isolated human and rabbit neutrophil
defensins were soluble in neat methanol but that the majority of
leukocyte proteins were methanol insoluble (data not shown). Exploiting
these solubility characteristics, we subjected rhesus macaque
neutrophil pellets to extraction with methanol-acetic acid, and this
process was followed by a methanol-water extraction step as described
in Materials and Methods. The resulting extract was highly enriched for
defensins and contained relatively small amounts of slower-migrating
proteins (Fig. 1C), allowing for further
RP-HPLC purification of low-molecular-weight proteins without the
intermediate gel filtration step used in previous defensin purification
protocols (9, 20). Fractions obtained by RP-HPLC
purification of the extract (Fig. 1A) were tested for antibacterial
activity in the agar diffusion assay described in Materials and
Methods. Peptides in peaks labeled 1 to 7, corresponding to RMAD-1 to
-7, respectively, were active against E. coli and S. aureus and had apparent molecular masses of ca. 4 kDa; the RMADs
were further purified by RP-HPLC under modified elution conditions to
obtain pure preparations (Fig. 1B). The relative abundance of the RMADs
isolated from several pools of rhesus macaque neutrophils was
determined (RMAD-1
RMAD-2 > RMAD-4
RMAD-5 > RMAD-6
RMAD-7 > RMAD-3), and the combined yield of
RMADs was ca. 900 µg per 109 cells. There was
batch-to-batch variability in the quantities of individual RMADs
obtained, and some samples lacked one or more of RMAD-3 to -7. This
variability may reflect differing levels of expression in individual
animals and/or allelic heterogeneity.

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FIG. 1.
Purification of RMADs. (A) Methanol-acid extracts of
neutrophil-enriched leukocytes were chromatographed on a 4.6- by 250-mm
Vydac C18 column equilibrated in 0.1% TFA-H2O
(solvent A) at a flow rate of 1.0 ml/min. A linear gradient of
acetonitrile containing 0.1% TFA (solvent B) was applied as indicated
by the dashed line. Fractions 1, 2, 3, 4, 5, 6, and 7 contained RMAD-1,
-2, -3, -4, -5, -6, and -7, respectively. Fraction 2' contained a
methionine-oxidized form of RMAD-2. (B) Analytical RP-HPLC of ca. 1 µg of each purified RMAD was performed by rechromatographing samples
as described for panel A but with a linear 0-to-40% gradient of
acetonitrile developed over 60 min. (C) A 12.5% acrylamide acid-urea
gel was loaded with 5% acetic acid extract (AE) of 3 × 106 buffy coat cells, a methanol-acetic
acid-methanol-water extract (ME) of 7 × 106 buffy
coat cells, and 0.5 to 1.5 µg each of RMAD-1 to -7. The gel was
stained with formalin-Coomassie blue.
|
|
Sequence analysis of RMAD-1 to -8.
The amino acid sequences of
RMAD-1 to -7 were determined by automated Edman sequencing (Fig.
2). The close agreement between the
calculated masses and those determined by MALDI-TOF MS analysis confirmed that the sequences obtained were complete. The sequence of
the peptide from peak 2' (Fig. 1A) was the same as that of RMAD-2, but
the mass of the former was 17.9 atomic mass units more than that of the
latter, suggesting that the 2' peptide is the Met-21 sulfoxide
derivative of RMAD-2. cDNAs corresponding to the coding regions of six
of the seven isolated peptides and that of an additional peptide not
isolated, RMAD-8, were isolated and sequenced; all of the DNA sequences
were in agreement with the sequences obtained by Edman degradation.

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FIG. 2.
Amino acid sequences of RMAD-1 to -8. Complete amino
acid sequences of RMAD-1 to -7 were determined by Edman sequencing and
confirmed by MALDI-TOF MS. The sequence of RMAD-8 was deduced from its
cDNA. The two peptide subfamilies are aligned manually with HNP-1 or
HD-5. Amino acids that vary among members of the subfamilies are
shaded. The 11 highly conserved residues found in nearly all myeloid
-defensins are denoted by asterisks. The net charge listed for each
peptide was calculated at pH 7. MW, molecular weight; Exptal,
experimental.
|
|
As shown in Fig.
2, the eight RMADs comprise two

-defensin
subfamilies. Those included in the first subgroup, RMAD-1 to -3
and -8, differ from each other only by substitutions at positions
22 and/or 23 and differ in sequence from HNP-1 at four or five
residue positions.
The RMAD-4 to -7 subgroup showed a high degree
of identity among its
members, the only differences being an additional
amino-terminal
arginine in RMAD-4 and -6 and serine-for-phenylalanine
substitutions 6 residues from the carboxyl terminus of each peptide.
However, the
subgroups containing RMAD-1 to -3 and -8 and RMAD-4
to -7 were
remarkably dissimilar, having

40% identity between
them. The two
subgroups also differed in net charge, as the overall
cationicity of
RMAD-4 to -7 (+7 or +8) was significantly greater
than that of RMAD-1
to -3 and -8 (+3 to +5). A BLAST P similarity
search (
2)
revealed that RMAD-4 to -7 are most similar to human
enteric

-defensin 5 (HD-5) (60.6 to 62.5% identity), a peptide
expressed in
human intestinal Paneth cells (
12) and female reproductive
epithelium (
18) but not in human
leukocytes.
RMAD precursors.
cDNAs containing the complete coding regions
for all RMADs except RMAD-2 were isolated and sequenced (Fig.
3). The initiation methionine in each
cDNA is preceded by the same Kozak box sequence, CCAGCC. The RMAD-1,
-3, and -8 cDNAs are >99% identical, and the only nucleotide
substitutions in the coding region result in amino acid substitutions
at residues 22 and 23 of the mature peptides, as noted above. Like the
HNP-1 precursor (94 amino acids [aa]), the RMAD-1, -3, and -8 precursors (96 aa) are prepropeptides and are 85% identical to HNP-1
at the amino acid level (Fig. 4).

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FIG. 3.
cDNA sequences of RMADs. cDNA sequences corresponding to
the coding regions of the two RMAD subfamilies are separately aligned.
Kozak boxes are outlined, and the initiation methionines are singly
underlined. The TGA stop codons are doubly underlined. Dots denote
nucleotide identities.
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FIG. 4.
RMAD precursors. Deduced amino acid sequences of members
of the two RMAD subfamilies are aligned with those of HNP-1 and HD-5.
Dots denote amino acid identities. Sequence gaps are shown as dashes.
The signal, prosegment, and mature peptide sequences are indicated.
Underlined arginines in the RMAD-4 and -5 and RMAD-6 and -7 precursors
identify the single residue that distinguishes the mature peptides in
each case (Fig. 2).
|
|
Analysis of cDNAs encoding the 94-aa precursors of RMAD-4 to -7 revealed that RMAD-4 and -5 and RMAD-6 and -7 derive from
alternative
processing of their respective prepropeptides (Fig.
4), consistent with
the occurrence of an additional amino-terminal
arginine in RMAD-4 and
-6 (Fig.
2). The RMAD-4 and -5 and the
RMAD-6 and -7 cDNAs are 98.8%
identical, and the corresponding
prepropeptide precursors are 97.9%
identical at the amino acid
level. When compared to HD-5, RMAD-4 and -5 and RMAD-6 and -7
precursors were 72 to 73% identical to the human
enteric defensin
at the protein level and 83% identical at the
nucleotide level
(Fig.
3 and
4).
Immunohistochemical experiments.
Dot blot analyses
demonstrated that anti-HNP-1 to -3 antibody recognized RMAD-1 to -3 but
not RMAD-4 to -7. To identify the cells that were RMAD-1 to -3 positive, rhesus buffy coat cytospin preparations were immunostained
with anti-HNP-1 antibody. Punctate cytoplasmic immunoreactivity was
observed in neutrophils (Fig. 5) but in
no other leukocytes, an immunostaining pattern identical to that
demonstrated for HNP-1 to -3 (9), peptides that are present
in a subpopulation of azurophil granules of human neutrophils.

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FIG. 5.
Immunohistochemical staining of RMADs in neutrophils.
Buffy coat cytospin preparations were stained with anti-HNP-1 to -3 antiserum (A) or preimmune serum (B) as described in Materials and
Methods. The granular pattern of cytoplasmic staining of the two
neutrophils (A) is identical to that observed in the staining of HNP-1
to -3 in human polymorphonuclear leukocytes.
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|
Antimicrobial activities.
The antimicrobial activities of the
purified RMADs were evaluated with E. coli ML35, S. aureus 502A, L. monocytogenes EGD, and C. neoformans 271A as target organisms. An agar diffusion assay was
first used to assess the microbistatic or microbicidal activity of each
peptide. As shown in Fig. 6, all peptides
produced dose-dependent zones of clearing, but the relative potencies
of the peptides varied rather markedly depending on the target
organism. RMAD-1 and -2 were the least active peptides against S. aureus but were among the most active against L. monocytogenes. Similarly, RMAD-7 was highly effective against
C. neoformans but was the least active peptide against
L. monocytogenes. RMAD-3 was the
-defensin with the
greatest overall potency. Based on inhibition zone size, E. coli ML35 was the least susceptible of the organisms tested while
L. monocytogenes was the most sensitive.

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FIG. 6.
Antimicrobial activities of RMADs. RMAD-1 to -7 were
tested for their activities against the indicated organisms in an agar
diffusion assay. Five-microliter samples of each peptide, dissolved at
the indicated concentrations in 0.01% acetic acid, were applied to
wells in agarose seeded with 106 CFU of each organism per
plate. Zones of clearing were measured after incubation for 24 to
48 h.
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|
The microbicidal activities of RMAD-1, -2, -4, -5, and -7 were analyzed
by incubating the four test organisms with 0 to 40
µg of peptide per
ml for 2 h at 37°C (Fig.
7). The
HD-5-like peptides,
RMAD-4, -5, and -7, were substantially more
effective than the
HNP-1-like peptides, RMAD-1 and -2, in their killing
of
S. aureus and
L. monocytogenes. At 10 µg/ml,
RMAD-4, -5, and -7 killed >3
log units of both gram-positive organisms
whereas RMAD-1 and -2
and HNP-1 killed

1 log unit of either
bacterium. None of the
peptides killed
E. coli ML35 under
these conditions, indicating
that the activities against this organism
observed in the agar
diffusion assays (Fig.
6) were due to
bacteriostasis. In contrast,
all peptides tested were fungicidal for
C. neoformans and the
activities were approximately equal.
Interestingly, the anticryptococcal
activity of HNP-1 was substantially
less than that of RMAD-1 and
-2, even though it differs from the two
rhesus defensins by only
four amino acids (Fig.
2).

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FIG. 7.
Microbicidal activities of RMADs. Mixtures containing
2 × 106 CFU of each organism per ml were incubated
with purified RMADs at the indicated peptide concentrations for 2 h at 37°C in 10 mM PIPES (pH 7.4)-5 mM glucose. CFU were determined
after the plates were incubated at 37°C for 24 to 48 h.
|
|
 |
DISCUSSION |
In this study we isolated and characterized seven rhesus macaque
leukocyte defensins and identified one other by sequencing the cDNA
corresponding to its coding region. Our data demonstrate that
leukocytes of this Old World monkey contain two subfamilies of
defensins that are highly similar to either human myeloid (HNP-1 to -3)
or enteric (HD-5) defensins at the protein and DNA levels. Antibody
that recognized RMAD-1 to -3 immunostained neutrophils in a granular
pattern similar to that observed with human cells. Immunolocalization
of RMAD-4 to -7 must await production of appropriate antibody reagents,
but the fact that these peptides were isolated from highly purified
neutrophil preparations indicates that it is likely that they are also
granule constituents of polymorphonuclear leukocytes.
In previous studies we noted a general relationship between higher
defensin cationicity and greater microbicidal potency (23, 24). Since RMAD-4 to -7 are more cationic (+7 or +8) than any of
the human myeloid
-defensins or the HNP-1-like RMADs (Fig. 2), we
predicted that the more basic RMADs would be more potent than those
defensins with less charge. The predicted correlation held for killing
of S. aureus and L. monocytogenes, where the microbicidal potencies of RMAD-4, -5, and -7 were markedly superior to
those of RMAD-1 and -2 and HNP-1. However, relative cationicity did not
appear to be a factor in the killing of E. coli or C. neoformans, as none of the peptides killed E. coli and
all possessed significant and nearly equal fungicidal activities (Fig.
7). These results are consistent with those of previous studies
demonstrating that the microbicidal activities of
-defensins are not
merely a function of their net charge (7, 24). The data also
suggest that certain molecular features may have evolved to enable
different peptides, some of which differ by a single amino acid, to
interact selectively with one or more microbial targets, a feature of
defensin structure-activity relationships noted previously (1, 9, 15, 19). An understanding of how these subtle structural
alterations confer antimicrobial selectivity might provide valuable
insights into the molecular mode of action of
-defensins.
The number of myeloid
-defensin genes expressed in rhesus macaques
is not known. The sequences of the RMAD-4 and -5 and RMAD-6 and -7 cDNAs indicate that the corresponding peptide isoforms derive from
differential processing at the amino termini of the mature peptides
(Fig. 2 and 4). A similar relationship exists between HNP-2, which
lacks an amino-terminal residue present in HNP-1 or HNP-3 and is
produced by amino-terminal processing (8). Aside from
sequence relationships resulting from differential processing, the high
levels of cDNA and amino acid sequence similarity among peptides within
each RMAD subgroup may represent allelic diversity. The fact that
certain peptides were lacking in samples prepared from different
animals suggests that certain alleles (e.g., those in RMAD-4 to -7) may
be less frequent in the monkey colony that was studied. However,
resolution of these issues must await additional population studies as
well as genomic cloning and mapping of the rhesus macaque
-defensin locus.
Based on their genetic analyses of human myeloid and enteric defensin
genes, Bevins and coworkers have postulated that human myeloid defensin
genes are the hybrid products of unequal crossover events between
ancestral genes encoding HD-5 and HD-6, the modern enteric defensins
(4). In that scheme, the ancestral myeloid defensin had to
acquire its hematopoietic promoter for expression in myeloid cells.
Our results indicate that, in addition to HNP-1-like peptides
(RMAD-1 to -3 and -8), HD-5 orthologs (RMAD-4 to -7) that are expressed
in subhuman primates possess the required myeloid promoters. This
result suggests that the evolution of myeloid and enteric defensins in
humans differed from that in Old World monkeys or that a different
process led to the differentiation of human hematopoietic and
epithelial
-defensins. Further characterization of rhesus macaque
-defensin genes may provide insights on this evolutionary question.
 |
ACKNOWLEDGMENTS |
This study was supported in part by NIH grant AI22931 and
Biosource Technologies, Inc. (M.E.S.), and NIH grant RR00169 (C.J.M.).
We thank Chi Kim, Timothy Cole, Patti Tran, Ding Lu, and Yichuan Wang
for expert technical assistance and Agnes Henschen, Director of the UCI
Microchemical Core Facility.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Pathology, College of Medicine, University of California, Irvine, CA 92697-4800. Phone: (949) 824-2350. Fax: (949) 824-2346. E-mail: meselste{at}uci.edu.
Editor:
T. R. Kozel
 |
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Infection and Immunity, November 1999, p. 6139-6144, Vol. 67, No. 11
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